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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854024.1_cds_XP_016512417.1_25062
CDS Infomation

[gene=LOC107829481] [db_xref=GeneID:107829481] [protein=acyl-coenzyme A oxidase 3, peroxisomal-like isoform X2] [protein_id=XP_016512417.1] [location=join(7340..7851,9732..9849,9948..10055,10173..10345,10459..10558,10855..10929,11031..11161,11535..11670,11751..11870,12623..12769,12847..12951,13043..13144,13668..13916)] [gbkey=CDS]
Sequence

ATGAAAAATTCCCATTTTTCTTCATCATCATCTTATTCTTCTTCAATGGAAAAAGTGAAT
TTCAGAACAAAAGTCCTTAGCAGACACCTAAATCAAGAAAATCCAACACCCATAAATTCA
ATACTCCAATCTTTCCCATGTCTCAGTTACATCCCACCTGAATTTTCAGGACCATCTTCT
GTTTTTGACACAAAAGAAATGAGAAAACTTTTAGATGATCATAATTTAGAGGACAAAGAC
TGGCTTTTTGGTTTAATGTTAAAAAACAATCTTTTTAATCCAAAAATAAGGGGTGGCAAA
GTTTTTGTTTGCCCTGACTATAACCAGTCTAAAGAACAGCAAAGGGAAATTACTATGAGG
AGAATTGAGTATCTTCTTGAACATGGTGTTTTTAAAGGTTGGCTCACTGGTAATGGACCG
GAAGATGAGTTGAGGAAACTTGCTTTTACTGATGTTGTTAGCATCTTTGATCATTCTCTT
TCTGTCAAAATCGGCGTCCATTTTTTCTTATGGGGCGGTGCAATCAAGTTTTTTGGTACC
CAACGACATCATGATAAGTGGTTGAGGGACACAGAGAATTATGTGGTTAAGGGTTGCTTT
GCTATGACAGAGTTGGGACATGGAAGTAATGTTCGAGGTATTGAAACAGTCACAACCTAT
GATTCAAGCACCGGAGAGTTTGTCATAAACACTCCGTGTGAATCAGCTCAGAAGTATTGG
ATTGGCGGTGCAGCTAATCATGCAACACATACAGTAGTTTTCTCTCAGCTCCACATTGAC
GGGAAAAATCAAGGTGTCCATGCTTTTATTACCCAGATCAGAGATGAAAATGGCAACATT
TGTCCAAACATCCGTATAGCTGATTGTGGTCACAAGATTGGCTTGAATGGGGTTGACAAT
GGTAGAATCTGGTTTGACAATGTCCGGGTACCCAGAGAAAATTTGTTAAATTCAGTGGCG
GATGTTTCTCCAGACGGGAAATATCTTACTGCTATTAAGGACCCTGACCAGCGATTTGCA
GCATTTATGGCCCCTTTGACATCTGGTCGTGTGACAATCGCAGTTAGTGCAACTTACTCA
GCAAAGATTGGTTTGGCGACTGCATTAAGATACTCGCTGACAAGGAGAGCATTTTCAGTT
ACTCCTAATGGACCAGAAGTTCTTATACTCGATTATCCAAGTCATCAACGACGACTTCTT
CCTCTTCTTGCAAAAACATATGCTATGAGCTTTGCTTCTAACTACTTGAAAAAGATTTAC
GTCAAGAGGACACCTGAGATGAACAAAGTTATTCATGTTATTTCAAGTGCATTCAAAGCT
ACAGCAAGTTGGCATAACATGCGAACTCTTCAGGAATGTCGTGAAGCCTGTGGAGGCCAA
GGGTTGAAGACTGAAAATCGGGTTGGCCAGCTGAAAGGTGAATTTGATGTGCAGTCTACT
TTTGAGGGTGACAACAATGTTCTTATGCAACAGGTTAGCAAGGCACTTCTTGGGGAATAT
GTGACAGCCAAAAGGAGTAAGAAGCCGTTCAAAGGATTGGGATTAGAACACATGAACAAC
TCTTGTCCCGTCGTACCTTCACAACTCACAAGTTCCGCAATGAGGCAATCCCAATTCCAG
AACGACATATTCTGCCTACGAGAACGAGACCTGTTGGAACGTTTTGCTGCTGAAGTTTCA
TTATGCCAGTCACAGGGGAAAAGCAAAGAATATGCATTTACTTTGAATTATCAGCTCGCT
GAAGACCTTGGGAGAGCCTTCTCTGACCGAGCAGTTCTGCATACTTTCCTCGAGGCAGAG
GCAACCGTCACGTCTGGCCCACTTAAGGATATTTTGGGGCTTGTGAGATCGATGTATGTT
TTGGTCACCCTAGAGGAGGATGTTGCATTCCTCCGATACGGATACTTGTCAACGGACAAT
GCTGCTGCGGTGAGAAAAGAAGTTGCAAATCTCTGCAGTGAACTAAGGCCACATGCACTT
TCCTTGGTCAGTTCTTTCGGCATACCCGATGCTTTCTTGGGCCCTATAGCTTTCAATTGG
GTTGAAGCCAATGTTTGGTCTTCTGAACAAAACTAG

Peptide Sequence

PEP ID

XP_016512417.1
PEP Infomation

PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like isoform X2 [Nicotiana tabacum]
Sequence

MKNSHFSSSSSYSSSMEKVNFRTKVLSRHLNQENPTPINSILQSFPCLSYIPPEFSGPSS
VFDTKEMRKLLDDHNLEDKDWLFGLMLKNNLFNPKIRGGKVFVCPDYNQSKEQQREITMR
RIEYLLEHGVFKGWLTGNGPEDELRKLAFTDVVSIFDHSLSVKIGVHFFLWGGAIKFFGT
QRHHDKWLRDTENYVVKGCFAMTELGHGSNVRGIETVTTYDSSTGEFVINTPCESAQKYW
IGGAANHATHTVVFSQLHIDGKNQGVHAFITQIRDENGNICPNIRIADCGHKIGLNGVDN
GRIWFDNVRVPRENLLNSVADVSPDGKYLTAIKDPDQRFAAFMAPLTSGRVTIAVSATYS
AKIGLATALRYSLTRRAFSVTPNGPEVLILDYPSHQRRLLPLLAKTYAMSFASNYLKKIY
VKRTPEMNKVIHVISSAFKATASWHNMRTLQECREACGGQGLKTENRVGQLKGEFDVQST
FEGDNNVLMQQVSKALLGEYVTAKRSKKPFKGLGLEHMNNSCPVVPSQLTSSAMRQSQFQ
NDIFCLRERDLLERFAAEVSLCQSQGKSKEYAFTLNYQLAEDLGRAFSDRAVLHTFLEAE
ATVTSGPLKDILGLVRSMYVLVTLEEDVAFLRYGYLSTDNAAAVRKEVANLCSELRPHAL
SLVSSFGIPDAFLGPIAFNWVEANVWSSEQN

Transcript Sequence

Gene sequence data has not been registered.